Provide the appropriate background and introduce methods of phenotyping based on imaging, with a focus on dedicated image processing technics with an open source software (Fiji). 


Basic knowledge of plant physiology and experimental procedures. 

Learning Outcomes

The students will understand the phenotyping methods and will be in position to utilize such a method if an opportunity arises. The students will be able to identify computer vision tools and to build algorithms for image processing in order to extract information corresponding to the phenotypic trait to be measured.


Presentations for each day were uploaded

Content Delivery

The content of the lesson is available. 

Coursework And Assignment Details

The students will work in teams to study and develop image based phenotyping methods widely used in the most popular phenotyping platforms.